Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.05■□□□□ 0.48
MSI1O43347 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.05■□□□□ 0.48
MSI1O43347 LINC00982-205ENST00000420957 435 ntBASIC18.05■□□□□ 0.48
MSI1O43347 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.05■□□□□ 0.48
MSI1O43347 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.05■□□□□ 0.48
MSI1O43347 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.05■□□□□ 0.48
MSI1O43347 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.05■□□□□ 0.48
MSI1O43347 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.05■□□□□ 0.48
MSI1O43347 AC105339.3-201ENST00000560043 636 ntBASIC18.05■□□□□ 0.48
MSI1O43347 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.05■□□□□ 0.48
MSI1O43347 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.05■□□□□ 0.48
MSI1O43347 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.05■□□□□ 0.48
MSI1O43347 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
MSI1O43347 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.05■□□□□ 0.48
MSI1O43347 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MSI1O43347 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.05■□□□□ 0.48
MSI1O43347 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MSI1O43347 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.05■□□□□ 0.48
MSI1O43347 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 AC006504.4-201ENST00000592118 1568 ntBASIC18.04■□□□□ 0.48
MSI1O43347 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.04■□□□□ 0.48
MSI1O43347 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
MSI1O43347 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
MSI1O43347 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
MSI1O43347 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 AL022342.1-201ENST00000400363 863 ntBASIC18.04■□□□□ 0.48
MSI1O43347 KRT18P27-201ENST00000427733 1299 ntBASIC18.04■□□□□ 0.48
MSI1O43347 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.04■□□□□ 0.48
MSI1O43347 AC098831.1-202ENST00000438821 336 ntBASIC18.04■□□□□ 0.48
MSI1O43347 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.04■□□□□ 0.48
MSI1O43347 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.04■□□□□ 0.48
MSI1O43347 AC006557.2-201ENST00000592985 1240 ntBASIC18.04■□□□□ 0.48
MSI1O43347 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.04■□□□□ 0.48
MSI1O43347 AC004706.3-202ENST00000621574 984 ntBASIC18.04■□□□□ 0.48
MSI1O43347 AC117500.6-201ENST00000624871 588 ntBASIC18.04■□□□□ 0.48
MSI1O43347 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MSI1O43347 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
MSI1O43347 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
MSI1O43347 PCDHB18P-201ENST00000524813 2368 ntBASIC18.03■□□□□ 0.48
MSI1O43347 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.03■□□□□ 0.48
MSI1O43347 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
MSI1O43347 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.03■□□□□ 0.48
MSI1O43347 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.03■□□□□ 0.48
MSI1O43347 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.03■□□□□ 0.48
MSI1O43347 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.03■□□□□ 0.48
MSI1O43347 AC073621.1-201ENST00000392730 636 ntBASIC18.03■□□□□ 0.48
MSI1O43347 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.03■□□□□ 0.48
MSI1O43347 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.03■□□□□ 0.48
MSI1O43347 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.03■□□□□ 0.48
MSI1O43347 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.03■□□□□ 0.48
MSI1O43347 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.03■□□□□ 0.48
MSI1O43347 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MSI1O43347 AL139424.1-201ENST00000607572 797 ntBASIC18.03■□□□□ 0.48
MSI1O43347 BX640515.1-201ENST00000617215 977 ntBASIC18.03■□□□□ 0.48
MSI1O43347 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.03■□□□□ 0.48
MSI1O43347 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.03■□□□□ 0.48
MSI1O43347 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MSI1O43347 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MSI1O43347 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
MSI1O43347 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MSI1O43347 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MSI1O43347 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
MSI1O43347 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MSI1O43347 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
MSI1O43347 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MSI1O43347 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms