Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN5O00501 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN5O00501 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CLDN5O00501 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLDN5O00501 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLDN5O00501 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN5O00501 UNC93B6-202ENST00000528242 690 ntBASIC18.32■□□□□ 0.52
CLDN5O00501 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.32■□□□□ 0.52
CLDN5O00501 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN5O00501 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.32■□□□□ 0.52
CLDN5O00501 AL671883.3-201ENST00000603274 991 ntBASIC18.32■□□□□ 0.52
CLDN5O00501 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN5O00501 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN5O00501 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN5O00501 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN5O00501 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN5O00501 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLDN5O00501 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN5O00501 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN5O00501 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN5O00501 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLDN5O00501 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLDN5O00501 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN5O00501 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLDN5O00501 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN5O00501 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN5O00501 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN5O00501 ACTG1P4-201ENST00000425123 1122 ntBASIC18.31■□□□□ 0.52
CLDN5O00501 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN5O00501 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN5O00501 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN5O00501 AC106730.1-201ENST00000566722 1090 ntBASIC18.31■□□□□ 0.52
CLDN5O00501 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CLDN5O00501 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN5O00501 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN5O00501 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLDN5O00501 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN5O00501 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLDN5O00501 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CLDN5O00501 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN5O00501 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN5O00501 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLDN5O00501 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.3■□□□□ 0.52
CLDN5O00501 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN5O00501 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN5O00501 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN5O00501 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLDN5O00501 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 PCDHB18P-201ENST00000524813 2368 ntBASIC18.3■□□□□ 0.52
CLDN5O00501 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN5O00501 PTCHD3P3-201ENST00000403073 906 ntBASIC18.3■□□□□ 0.52
CLDN5O00501 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.3■□□□□ 0.52
CLDN5O00501 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN5O00501 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.3■□□□□ 0.52
CLDN5O00501 AC005593.1-201ENST00000624894 515 ntBASIC18.3■□□□□ 0.52
CLDN5O00501 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLDN5O00501 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLDN5O00501 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CLDN5O00501 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN5O00501 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN5O00501 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLDN5O00501 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN5O00501 AL590787.1-201ENST00000568856 1315 ntBASIC18.29■□□□□ 0.52
CLDN5O00501 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms