Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 AC019129.2-201ENST00000609837 1235 ntBASIC17.38■□□□□ 0.37
CFAP99D6REC4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 AC011270.2-201ENST00000624293 2550 ntBASIC17.38■□□□□ 0.37
CFAP99D6REC4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.38■□□□□ 0.37
CFAP99D6REC4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 AL049757.1-201ENST00000616842 1596 ntBASIC17.37■□□□□ 0.37
CFAP99D6REC4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.37■□□□□ 0.37
CFAP99D6REC4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.37■□□□□ 0.37
CFAP99D6REC4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP99D6REC4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 AC003669.1-201ENST00000334569 611 ntBASIC17.36■□□□□ 0.37
CFAP99D6REC4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 KRT8P10-201ENST00000450021 1447 ntBASIC17.36■□□□□ 0.37
CFAP99D6REC4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 AL353593.2-201ENST00000602529 1483 ntBASIC17.36■□□□□ 0.37
CFAP99D6REC4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP99D6REC4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CFAP99D6REC4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP99D6REC4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP99D6REC4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CFAP99D6REC4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP99D6REC4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP99D6REC4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP99D6REC4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP99D6REC4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CFAP99D6REC4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP99D6REC4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP99D6REC4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP99D6REC4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP99D6REC4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP99D6REC4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms