Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 AC079776.4-201ENST00000511039 504 ntBASIC17.68■□□□□ 0.42
CAPN8A6NHC0 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 EMBP1-201ENST00000458200 901 ntBASIC17.67■□□□□ 0.42
CAPN8A6NHC0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 LINC01451-201ENST00000623792 534 ntBASIC17.67■□□□□ 0.42
CAPN8A6NHC0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN8A6NHC0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 AL049757.1-201ENST00000616842 1596 ntBASIC17.66■□□□□ 0.42
CAPN8A6NHC0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 AC008894.3-201ENST00000624324 3103 ntBASIC17.66■□□□□ 0.42
CAPN8A6NHC0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 MIR1233-2-201ENST00000408138 82 ntBASIC17.66■□□□□ 0.42
CAPN8A6NHC0 MIR1233-1-201ENST00000408722 82 ntBASIC17.66■□□□□ 0.42
CAPN8A6NHC0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 AC064862.7-201ENST00000604520 867 ntBASIC17.66■□□□□ 0.42
CAPN8A6NHC0 AD001527.2-201ENST00000622994 785 ntBASIC17.66■□□□□ 0.42
CAPN8A6NHC0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 AL355312.1-201ENST00000407115 2176 ntBASIC17.66■□□□□ 0.42
CAPN8A6NHC0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN8A6NHC0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms