Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB2Q9Y5E7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB2Q9Y5E7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB2Q9Y5E7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB2Q9Y5E7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB2Q9Y5E7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 AL355312.1-201ENST00000407115 2176 ntBASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 AC006504.4-201ENST00000592118 1568 ntBASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 NCF1C-201ENST00000438382 1427 ntBASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 BX842568.4-201ENST00000421222 227 ntBASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 AC002558.1-201ENST00000488906 803 ntBASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB2Q9Y5E7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 ELK2BP-201ENST00000415014 1224 ntBASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 AC007967.2-201ENST00000432613 625 ntBASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB2Q9Y5E7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PCDHB2Q9Y5E7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.02■□□□□ 0.63
PCDHB2Q9Y5E7 AC009336.1-201ENST00000608941 1553 ntBASIC19.02■□□□□ 0.63
PCDHB2Q9Y5E7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB2Q9Y5E7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 AL139424.1-201ENST00000607572 797 ntBASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 AC133963.1-201ENST00000504166 1679 ntBASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms