Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 SDHAP2-201ENST00000455183 2001 ntBASIC18.78■□□□□ 0.6
USP15Q9Y4E8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 MCCD1P2-201ENST00000423228 335 ntBASIC18.78■□□□□ 0.6
USP15Q9Y4E8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 BX005266.1-201ENST00000473402 457 ntBASIC18.77■□□□□ 0.6
USP15Q9Y4E8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 YBX1P5-201ENST00000509441 847 ntBASIC18.77■□□□□ 0.6
USP15Q9Y4E8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 AC005593.1-201ENST00000624894 515 ntBASIC18.77■□□□□ 0.6
USP15Q9Y4E8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
USP15Q9Y4E8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
USP15Q9Y4E8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP15Q9Y4E8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP15Q9Y4E8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.77■□□□□ 0.59
USP15Q9Y4E8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP15Q9Y4E8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
USP15Q9Y4E8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP15Q9Y4E8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP15Q9Y4E8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 AC108751.1-201ENST00000490852 363 ntBASIC18.76■□□□□ 0.59
USP15Q9Y4E8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 MIR4469-201ENST00000583919 79 ntBASIC18.76■□□□□ 0.59
USP15Q9Y4E8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 AC124067.4-201ENST00000519691 2379 ntBASIC18.76■□□□□ 0.59
USP15Q9Y4E8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.76■□□□□ 0.59
USP15Q9Y4E8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP15Q9Y4E8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP15Q9Y4E8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP15Q9Y4E8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP15Q9Y4E8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP15Q9Y4E8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms