Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AL009178.2-201ENST00000597278 2719 ntBASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AC010327.5-201ENST00000586923 3061 ntBASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AC009102.3-201ENST00000623118 1491 ntBASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AC005837.3-201ENST00000612163 286 ntBASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AC120498.8-201ENST00000614275 531 ntBASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AC060834.1-201ENST00000443027 2032 ntBASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 KRT8P50-201ENST00000562022 1438 ntBASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.54□□□□□ -0.4
CHTOPQ9Y3Y2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 CICP20-201ENST00000443330 2801 ntBASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 Z85996.1-201ENST00000494644 937 ntBASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 SDHAP2-201ENST00000455183 2001 ntBASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms