Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 AC097488.1-201ENST00000507834 756 ntBASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 LINC01311-201ENST00000565162 1445 ntBASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 KRT8P47-201ENST00000604727 1398 ntBASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 LINC02012-201ENST00000608206 1725 ntBASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 AC092171.3-201ENST00000610122 2651 ntBASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCL1Q9Y2P8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 FAM197Y1-201ENST00000421178 764 ntBASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 AC008687.5-201ENST00000593746 558 ntBASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCL1Q9Y2P8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 AC092068.3-201ENST00000587894 2016 ntBASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.26□□□□□ -0.13
RCL1Q9Y2P8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms