Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC25.6■■□□□ 1.69
SHANK2Q9UPX8 AC091167.2-201ENST00000579581 588 ntBASIC25.6■■□□□ 1.69
SHANK2Q9UPX8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 SLC22A20-204ENST00000530038 1673 ntBASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 SPDYE11-202ENST00000450699 704 ntBASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 GATB-205ENST00000508611 605 ntTSL 2 BASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 FAM86C2P-203ENST00000528684 1004 ntBASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 SPDYE9P-201ENST00000570642 692 ntBASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 SPDYE10P-202ENST00000612005 668 ntBASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 SPDYE8P-202ENST00000612377 668 ntBASIC25.59■■□□□ 1.69
SHANK2Q9UPX8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 AL353732.1-201ENST00000569618 1459 ntBASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 HCG4-201ENST00000418983 998 ntBASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 AC079140.1-201ENST00000508039 487 ntBASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 LINC00628-201ENST00000628516 1289 ntBASIC25.58■■□□□ 1.69
SHANK2Q9UPX8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC25.58■■□□□ 1.68
SHANK2Q9UPX8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC25.58■■□□□ 1.68
SHANK2Q9UPX8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.68
SHANK2Q9UPX8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC25.58■■□□□ 1.68
SHANK2Q9UPX8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 KRT18P32-201ENST00000424695 1287 ntBASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 AC007274.1-201ENST00000439805 662 ntBASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 Z92544.3-201ENST00000624747 417 ntBASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHANK2Q9UPX8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 RNU1-129P-201ENST00000384064 167 ntBASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 CD7-202ENST00000578509 925 ntTSL 3 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 U1.21-201ENST00000580816 167 ntBASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 AC084121.4-201ENST00000641598 221 ntBASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 AF228730.8-201ENST00000642140 221 ntBASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC25.56■■□□□ 1.68
SHANK2Q9UPX8 AC008764.6-201ENST00000595909 2069 ntBASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 AC063926.2-201ENST00000623766 1308 ntBASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 AC015922.1-201ENST00000421102 1152 ntBASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms