Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB4Q9UN71 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB4Q9UN71 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB4Q9UN71 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGB4Q9UN71 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB4Q9UN71 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 GCSHP2-201ENST00000560971 527 ntBASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 AC133963.1-201ENST00000504166 1679 ntBASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 KRT89P-201ENST00000620027 1478 ntBASIC16.93■□□□□ 0.3
PCDHGB4Q9UN71 AL513477.1-201ENST00000602865 2407 ntBASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 AC145285.6-201ENST00000604632 637 ntBASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB4Q9UN71 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 AC132872.4-202ENST00000622924 2756 ntBASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 KRT18P65-201ENST00000439811 1286 ntBASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 AL138966.2-201ENST00000621997 464 ntBASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms