Protein–RNA interactions for Protein: Q9UHD1

CHORDC1, Cysteine and histidine-rich domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1Q9UHD1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 AC011467.2-201ENST00000598425 242 ntBASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 REXO1L6P-202ENST00000619970 1078 ntBASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 AC020916.1-201ENST00000587762 1774 ntBASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHORDC1Q9UHD1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 AC097374.2-201ENST00000618617 1306 ntBASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CHORDC1Q9UHD1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 SAPCD2P3-201ENST00000455031 850 ntBASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 AC009078.2-202ENST00000463353 338 ntBASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 AL160237.2-201ENST00000556165 472 ntBASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 AL121912.1-201ENST00000603683 238 ntBASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 LYSMD4-203ENST00000378904 2122 ntBASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHORDC1Q9UHD1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHORDC1Q9UHD1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.67■□□□□ 0.58
CHORDC1Q9UHD1 KRT8P10-201ENST00000450021 1447 ntBASIC18.67■□□□□ 0.58
CHORDC1Q9UHD1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CHORDC1Q9UHD1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHORDC1Q9UHD1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHORDC1Q9UHD1 AC007967.3-201ENST00000434308 558 ntBASIC18.67■□□□□ 0.58
CHORDC1Q9UHD1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.67■□□□□ 0.58
CHORDC1Q9UHD1 FDX1P1-201ENST00000449115 551 ntBASIC18.67■□□□□ 0.58
CHORDC1Q9UHD1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.67■□□□□ 0.58
CHORDC1Q9UHD1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHORDC1Q9UHD1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms