Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 RASA4DP-201ENST00000460726 1199 ntBASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 AL023973.1-201ENST00000624619 620 ntBASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPSNAP3AQ9UFN0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 AGGF1P2-201ENST00000426656 2106 ntBASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 AC140113.3-201ENST00000605663 199 ntBASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 AL139327.4-201ENST00000612362 153 ntBASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 AC079602.3-201ENST00000623931 403 ntBASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 AC116353.5-201ENST00000638148 1699 ntBASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPSNAP3AQ9UFN0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NIPSNAP3AQ9UFN0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NIPSNAP3AQ9UFN0 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.64■□□□□ 0.26
NIPSNAP3AQ9UFN0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPSNAP3AQ9UFN0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms