Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 ACTG1P4-201ENST00000425123 1122 ntBASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 AC005829.1-201ENST00000570002 483 ntBASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 AP001160.2-201ENST00000596071 487 ntBASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 REXO1L11P-201ENST00000620964 1927 ntBASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LRIT1Q9P2V4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 PI4KAP1-204ENST00000612579 1703 ntBASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 AC211486.1-202ENST00000416371 468 ntBASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 AC211476.1-201ENST00000503899 468 ntBASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.79■□□□□ 0.28
LRIT1Q9P2V4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 AC046185.3-201ENST00000623228 1824 ntBASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 AL513190.1-201ENST00000621254 727 ntBASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms