Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CXXC1Q9P0U4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CXXC1Q9P0U4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CXXC1Q9P0U4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 AL020996.1-203ENST00000536896 2307 ntBASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 COX5BP8-201ENST00000416911 349 ntBASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 AC245100.3-201ENST00000441281 285 ntBASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 AC004890.2-204ENST00000481968 304 ntBASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 AC027307.3-201ENST00000594262 1100 ntBASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.52■□□□□ 0.56
CXXC1Q9P0U4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CXXC1Q9P0U4 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.52■□□□□ 0.55
CXXC1Q9P0U4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CXXC1Q9P0U4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CXXC1Q9P0U4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CXXC1Q9P0U4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.52■□□□□ 0.55
CXXC1Q9P0U4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 RN7SL692P-201ENST00000464677 288 ntBASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.51■□□□□ 0.55
CXXC1Q9P0U4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 PIN1P1-201ENST00000412108 996 ntBASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 AC135776.1-201ENST00000319817 2481 ntBASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CXXC1Q9P0U4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CXXC1Q9P0U4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CXXC1Q9P0U4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CXXC1Q9P0U4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.49■□□□□ 0.55
CXXC1Q9P0U4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CXXC1Q9P0U4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CXXC1Q9P0U4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CXXC1Q9P0U4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CXXC1Q9P0U4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms