Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CNIH4Q9P003 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CNIH4Q9P003 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH4Q9P003 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH4Q9P003 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH4Q9P003 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH4Q9P003 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CNIH4Q9P003 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.32■□□□□ 0.2
CNIH4Q9P003 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 FAM220CP-201ENST00000395253 831 ntBASIC16.31■□□□□ 0.2
CNIH4Q9P003 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 INTS4P1-201ENST00000438455 1935 ntBASIC16.31■□□□□ 0.2
CNIH4Q9P003 LINC00304-203ENST00000565008 1864 ntBASIC16.31■□□□□ 0.2
CNIH4Q9P003 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH4Q9P003 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.31■□□□□ 0.2
CNIH4Q9P003 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 AL138688.1-201ENST00000624851 1594 ntBASIC16.3■□□□□ 0.2
CNIH4Q9P003 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 AD000864.1-201ENST00000624076 2295 ntBASIC16.3■□□□□ 0.2
CNIH4Q9P003 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 KRT8P47-201ENST00000604727 1398 ntBASIC16.3■□□□□ 0.2
CNIH4Q9P003 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 AC009949.1-201ENST00000623048 1830 ntBASIC16.3■□□□□ 0.2
CNIH4Q9P003 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH4Q9P003 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.3■□□□□ 0.2
CNIH4Q9P003 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH4Q9P003 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH4Q9P003 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CNIH4Q9P003 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH4Q9P003 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH4Q9P003 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.29■□□□□ 0.2
CNIH4Q9P003 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms