Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PIF1Q9H611 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PIF1Q9H611 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PIF1Q9H611 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.67■□□□□ 0.26
PIF1Q9H611 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
PIF1Q9H611 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.67■□□□□ 0.26
PIF1Q9H611 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.67■□□□□ 0.26
PIF1Q9H611 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.67■□□□□ 0.26
PIF1Q9H611 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PIF1Q9H611 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.67■□□□□ 0.26
PIF1Q9H611 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.67■□□□□ 0.26
PIF1Q9H611 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.67■□□□□ 0.26
PIF1Q9H611 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.67■□□□□ 0.26
PIF1Q9H611 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.67■□□□□ 0.26
PIF1Q9H611 LINC01023-201ENST00000606054 436 ntBASIC16.67■□□□□ 0.26
PIF1Q9H611 FAM87A-204ENST00000613235 858 ntBASIC16.67■□□□□ 0.26
PIF1Q9H611 AL139384.1-201ENST00000612143 3047 ntBASIC16.67■□□□□ 0.26
PIF1Q9H611 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.67■□□□□ 0.26
PIF1Q9H611 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PIF1Q9H611 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PIF1Q9H611 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PIF1Q9H611 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.67■□□□□ 0.26
PIF1Q9H611 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PIF1Q9H611 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
PIF1Q9H611 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
PIF1Q9H611 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PIF1Q9H611 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
PIF1Q9H611 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.66■□□□□ 0.26
PIF1Q9H611 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.66■□□□□ 0.26
PIF1Q9H611 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.66■□□□□ 0.26
PIF1Q9H611 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PIF1Q9H611 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.66■□□□□ 0.26
PIF1Q9H611 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PIF1Q9H611 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PIF1Q9H611 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.66■□□□□ 0.26
PIF1Q9H611 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PIF1Q9H611 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
PIF1Q9H611 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.66■□□□□ 0.26
PIF1Q9H611 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PIF1Q9H611 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PIF1Q9H611 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PIF1Q9H611 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.65■□□□□ 0.26
PIF1Q9H611 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.65■□□□□ 0.26
PIF1Q9H611 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 AP000523.1-201ENST00000398242 1049 ntBASIC16.65■□□□□ 0.26
PIF1Q9H611 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms