Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SLIRPQ9GZT3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 AC073347.1-201ENST00000421633 2643 ntBASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 ZNRF2P3-201ENST00000424200 374 ntBASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 BX276092.7-203ENST00000637198 1536 ntBASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 AC006538.1-201ENST00000567905 1585 ntBASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 AC006058.4-201ENST00000624016 1670 ntBASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLIRPQ9GZT3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 MIR4674-201ENST00000582457 87 ntBASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 AC013268.4-201ENST00000637413 2228 ntBASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLIRPQ9GZT3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms