Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 AC078925.2-201ENST00000624013 1973 ntBASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 HBZP1-201ENST00000354915 429 ntBASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 AC092597.1-201ENST00000487352 616 ntBASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.67■□□□□ 0.42
PHACTR1Q9C0D0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 AC007967.3-201ENST00000434308 558 ntBASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 AC005332.3-201ENST00000589904 676 ntBASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 AL353801.3-201ENST00000609898 542 ntBASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 AC011558.1-201ENST00000623459 338 ntBASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 AC133561.5-201ENST00000635547 218 ntBASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PHACTR1Q9C0D0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms