Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 REXO1L11P-201ENST00000620964 1927 ntBASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 AKAP8P1-201ENST00000434743 1349 ntBASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 AC244107.1-201ENST00000442033 332 ntBASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 AC093214.1-201ENST00000511688 1107 ntBASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 AC138028.4-201ENST00000564984 1845 ntBASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.98■□□□□ 0.95
RTFDC1Q9BY42 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 AF228730.6-201ENST00000641497 218 ntBASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 AC084121.3-201ENST00000641716 218 ntBASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 AC105233.6-201ENST00000642093 218 ntBASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 BICD1-207ENST00000551848 1962 ntBASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.97■□□□□ 0.95
RTFDC1Q9BY42 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 AL135744.1-201ENST00000565098 629 ntBASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 RARRES2P8-201ENST00000566335 367 ntBASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 MIR4515-201ENST00000584082 81 ntBASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 AL139327.4-201ENST00000612362 153 ntBASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTFDC1Q9BY42 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
RTFDC1Q9BY42 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms