Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
THUMPD3Q9BV44 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 PCDHA14-201ENST00000506751 2298 ntBASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 RASA4DP-201ENST00000460726 1199 ntBASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 AGGF1P2-201ENST00000426656 2106 ntBASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
THUMPD3Q9BV44 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 AK4P3-201ENST00000418260 669 ntBASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 AC009154.2-201ENST00000621177 724 ntBASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 AC006011.2-201ENST00000621313 1158 ntBASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms