Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 WWOX-216ENST00000569818 525 ntBASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOXF2Q9BQY4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 FAM197Y1-201ENST00000421178 764 ntBASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOXF2Q9BQY4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 AC022188.1-201ENST00000620960 1664 ntBASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 AP003041.3-201ENST00000527151 707 ntBASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 AC104771.1-201ENST00000603335 964 ntBASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 DGCR10-201ENST00000609839 495 ntBASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.35■□□□□ 0.53
RHOXF2Q9BQY4 AC105917.1-201ENST00000506637 2539 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms