Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 MYCLP1-201ENST00000372451 1075 ntBASIC20.22■□□□□ 0.83
SLF1Q9BQI6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 YBX2P1-201ENST00000394192 760 ntBASIC20.22■□□□□ 0.83
SLF1Q9BQI6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLF1Q9BQI6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 UPF3AP3-201ENST00000420996 769 ntBASIC20.21■□□□□ 0.83
SLF1Q9BQI6 AC005104.2-201ENST00000427818 678 ntBASIC20.21■□□□□ 0.83
SLF1Q9BQI6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 RPS15P9-201ENST00000494093 319 ntBASIC20.21■□□□□ 0.83
SLF1Q9BQI6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 AC010327.4-202ENST00000591484 748 ntBASIC20.21■□□□□ 0.83
SLF1Q9BQI6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SLF1Q9BQI6 AC097637.2-201ENST00000624096 1997 ntBASIC20.21■□□□□ 0.83
SLF1Q9BQI6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.83
SLF1Q9BQI6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 GPX1P2-201ENST00000429271 606 ntBASIC20.2■□□□□ 0.82
SLF1Q9BQI6 AC108073.2-201ENST00000464002 357 ntBASIC20.2■□□□□ 0.82
SLF1Q9BQI6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 IGHV3-65-201ENST00000523210 341 ntBASIC20.2■□□□□ 0.82
SLF1Q9BQI6 AC008667.4-201ENST00000607370 168 ntBASIC20.2■□□□□ 0.82
SLF1Q9BQI6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms