Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTPN18Q99952 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN18Q99952 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
PTPN18Q99952 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN18Q99952 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN18Q99952 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN18Q99952 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN18Q99952 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN18Q99952 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN18Q99952 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PTPN18Q99952 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN18Q99952 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN18Q99952 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN18Q99952 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN18Q99952 ALG1L8P-201ENST00000533887 760 ntBASIC19.76■□□□□ 0.75
PTPN18Q99952 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN18Q99952 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN18Q99952 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN18Q99952 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN18Q99952 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN18Q99952 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PTPN18Q99952 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PTPN18Q99952 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPN18Q99952 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PTPN18Q99952 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPN18Q99952 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN18Q99952 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN18Q99952 PIN1P1-201ENST00000412108 996 ntBASIC19.75■□□□□ 0.75
PTPN18Q99952 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPN18Q99952 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPN18Q99952 AC027307.3-201ENST00000594262 1100 ntBASIC19.75■□□□□ 0.75
PTPN18Q99952 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN18Q99952 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN18Q99952 REXO1L9P-201ENST00000604264 2108 ntBASIC19.75■□□□□ 0.75
PTPN18Q99952 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN18Q99952 REXO1L11P-201ENST00000620964 1927 ntBASIC19.74■□□□□ 0.75
PTPN18Q99952 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN18Q99952 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN18Q99952 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPN18Q99952 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN18Q99952 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN18Q99952 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN18Q99952 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN18Q99952 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN18Q99952 RN7SL692P-201ENST00000464677 288 ntBASIC19.74■□□□□ 0.75
PTPN18Q99952 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PTPN18Q99952 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN18Q99952 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PTPN18Q99952 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPN18Q99952 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN18Q99952 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PTPN18Q99952 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN18Q99952 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN18Q99952 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN18Q99952 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN18Q99952 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN18Q99952 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PTPN18Q99952 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN18Q99952 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PTPN18Q99952 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPN18Q99952 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPN18Q99952 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PTPN18Q99952 MIR346-201ENST00000362234 95 ntBASIC19.73■□□□□ 0.75
PTPN18Q99952 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPN18Q99952 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 TSSK5P-201ENST00000423978 907 ntBASIC19.73■□□□□ 0.75
PTPN18Q99952 AC241585.1-201ENST00000433527 519 ntBASIC19.73■□□□□ 0.75
PTPN18Q99952 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPN18Q99952 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.73■□□□□ 0.75
PTPN18Q99952 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.73■□□□□ 0.75
PTPN18Q99952 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN18Q99952 MIR4453-201ENST00000584019 89 ntBASIC19.73■□□□□ 0.75
PTPN18Q99952 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN18Q99952 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PTPN18Q99952 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN18Q99952 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN18Q99952 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms