Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 LTB4R2-202ENST00000528054 3092 ntBASIC17.41■□□□□ 0.38
SIPA1Q96FS4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 MKNK2P1-201ENST00000437526 628 ntBASIC17.41■□□□□ 0.38
SIPA1Q96FS4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 PDPK2P-202ENST00000562415 1191 ntBASIC17.41■□□□□ 0.38
SIPA1Q96FS4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 OR7E47P-204ENST00000575924 449 ntBASIC17.41■□□□□ 0.38
SIPA1Q96FS4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 AL078644.1-201ENST00000609881 752 ntBASIC17.41■□□□□ 0.38
SIPA1Q96FS4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 AC138028.4-201ENST00000564984 1845 ntBASIC17.41■□□□□ 0.38
SIPA1Q96FS4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 AC104581.1-202ENST00000635932 2618 ntBASIC17.41■□□□□ 0.38
SIPA1Q96FS4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIPA1Q96FS4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 AL590787.1-201ENST00000568856 1315 ntBASIC17.4■□□□□ 0.38
SIPA1Q96FS4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 AC046185.3-201ENST00000623228 1824 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms