Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 STARP1-201ENST00000397973 869 ntBASIC15.18■□□□□ 0.02
CPNE2Q96FN4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 AC005104.2-201ENST00000427818 678 ntBASIC15.18■□□□□ 0.02
CPNE2Q96FN4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 ZNF444P1-201ENST00000559497 298 ntBASIC15.18■□□□□ 0.02
CPNE2Q96FN4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CPNE2Q96FN4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 REXO1L11P-201ENST00000620964 1927 ntBASIC15.17■□□□□ 0.02
CPNE2Q96FN4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 AP001094.4-201ENST00000579008 2176 ntBASIC15.17■□□□□ 0.02
CPNE2Q96FN4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.17■□□□□ 0.02
CPNE2Q96FN4 TSPY15P-201ENST00000457163 923 ntBASIC15.17■□□□□ 0.02
CPNE2Q96FN4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 AC004263.2-201ENST00000617183 678 ntBASIC15.17■□□□□ 0.02
CPNE2Q96FN4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 AL023973.1-201ENST00000624619 620 ntBASIC15.17■□□□□ 0.02
CPNE2Q96FN4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 AL162727.3-201ENST00000635661 2787 ntBASIC15.17■□□□□ 0.02
CPNE2Q96FN4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE2Q96FN4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 UBALD1-205ENST00000590891 2641 ntBASIC15.16■□□□□ 0.02
CPNE2Q96FN4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 HLA-F-220ENST00000434407 884 ntBASIC15.16■□□□□ 0.02
CPNE2Q96FN4 AP003733.1-201ENST00000491725 852 ntBASIC15.16■□□□□ 0.02
CPNE2Q96FN4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE2Q96FN4 AC068587.6-202ENST00000641839 5619 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms