Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 MIR3180-1-201ENST00000580374 94 ntBASIC17.74■□□□□ 0.43
RTP4Q96DX8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 MIR3180-3-201ENST00000584616 94 ntBASIC17.74■□□□□ 0.43
RTP4Q96DX8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 BNIP3P18-201ENST00000593976 575 ntBASIC17.74■□□□□ 0.43
RTP4Q96DX8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 AC005915.1-201ENST00000624912 2018 ntBASIC17.74■□□□□ 0.43
RTP4Q96DX8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 KRT18P1-202ENST00000452408 1331 ntBASIC17.73■□□□□ 0.43
RTP4Q96DX8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTP4Q96DX8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTP4Q96DX8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTP4Q96DX8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTP4Q96DX8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTP4Q96DX8 IGHV3-47-201ENST00000425060 335 ntBASIC17.73■□□□□ 0.43
RTP4Q96DX8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTP4Q96DX8 PRELID1P1-202ENST00000567272 903 ntBASIC17.73■□□□□ 0.43
RTP4Q96DX8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 Z69720.1-201ENST00000601483 472 ntBASIC17.73■□□□□ 0.43
RTP4Q96DX8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTP4Q96DX8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTP4Q96DX8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTP4Q96DX8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTP4Q96DX8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTP4Q96DX8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RTP4Q96DX8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 PMPCAP1-201ENST00000508114 1576 ntBASIC17.72■□□□□ 0.43
RTP4Q96DX8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 KLF4P1-201ENST00000412782 1185 ntBASIC17.72■□□□□ 0.43
RTP4Q96DX8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 KRT17P6-201ENST00000453795 1220 ntBASIC17.72■□□□□ 0.43
RTP4Q96DX8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 AC073592.5-201ENST00000624854 528 ntBASIC17.72■□□□□ 0.43
RTP4Q96DX8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.72■□□□□ 0.43
RTP4Q96DX8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 AC124067.4-201ENST00000519691 2379 ntBASIC17.72■□□□□ 0.43
RTP4Q96DX8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTP4Q96DX8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms