Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 VENTXP5-201ENST00000523979 775 ntBASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 AC104390.1-201ENST00000555663 520 ntBASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 MIR3917-201ENST00000580971 93 ntBASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 IER3-202ENST00000376377 1350 ntBASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAB40AQ8WXH6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 REXO1L11P-201ENST00000620964 1927 ntBASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB40AQ8WXH6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 HBZP1-201ENST00000354915 429 ntBASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 UPK3BP1-201ENST00000428678 509 ntBASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 AC008687.5-201ENST00000593746 558 ntBASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 AC083849.1-201ENST00000615227 514 ntBASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 AC005332.1-201ENST00000577698 1310 ntBASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40AQ8WXH6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms