Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 AC063926.2-201ENST00000623766 1308 ntBASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 AC122714.2-201ENST00000502787 707 ntBASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 KRT19P2-202ENST00000557173 1012 ntBASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
U2AF1L4Q8WU68 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 AC004461.1-201ENST00000412461 403 ntBASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 AC015922.1-201ENST00000421102 1152 ntBASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 AC010507.1-201ENST00000633895 436 ntBASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
U2AF1L4Q8WU68 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 AC096734.2-201ENST00000562054 433 ntBASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 AC010654.1-201ENST00000615722 808 ntBASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 Z92544.3-201ENST00000624747 417 ntBASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 AC073592.5-201ENST00000624854 528 ntBASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2AF1L4Q8WU68 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 AL020989.1-201ENST00000422979 469 ntBASIC19.86■□□□□ 0.77
U2AF1L4Q8WU68 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms