Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.38
RAB3IL1Q8TBN0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB3IL1Q8TBN0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB3IL1Q8TBN0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RAB3IL1Q8TBN0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 FLJ38576-201ENST00000623820 2459 ntBASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 SNORA78-201ENST00000459373 127 ntBASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 MIR4497-201ENST00000583208 89 ntBASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 AC092865.7-201ENST00000641832 219 ntBASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3IL1Q8TBN0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 RPS2P55-201ENST00000397318 883 ntBASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 AC012618.2-201ENST00000428058 849 ntBASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 AC107956.1-201ENST00000494359 873 ntBASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 AC113410.3-201ENST00000623366 203 ntBASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms