Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 GUSBP6-202ENST00000438529 1198 ntBASIC13.05□□□□□ -0.32
NUP35Q8NFH5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 MIR3180-4-201ENST00000582223 153 ntBASIC13.05□□□□□ -0.32
NUP35Q8NFH5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 AL353708.3-201ENST00000610272 989 ntBASIC13.05□□□□□ -0.32
NUP35Q8NFH5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NUP35Q8NFH5 LINC00167-201ENST00000530583 1419 ntBASIC13.05□□□□□ -0.32
NUP35Q8NFH5 KRT8P9-201ENST00000558927 1449 ntBASIC13.05□□□□□ -0.32
NUP35Q8NFH5 AL365203.3-201ENST00000609742 2057 ntBASIC13.04□□□□□ -0.32
NUP35Q8NFH5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 AC063926.3-201ENST00000624734 5658 ntBASIC13.04□□□□□ -0.32
NUP35Q8NFH5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 AL023875.1-201ENST00000640777 796 ntBASIC13.04□□□□□ -0.32
NUP35Q8NFH5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
NUP35Q8NFH5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 AC093525.9-201ENST00000624961 1746 ntBASIC13.03□□□□□ -0.32
NUP35Q8NFH5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 AC239809.2-201ENST00000415381 517 ntBASIC13.03□□□□□ -0.32
NUP35Q8NFH5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms