Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 AC116353.5-201ENST00000638148 1699 ntBASIC16.31■□□□□ 0.2
NUP43Q8NFH3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 ATP5G2P1-201ENST00000433580 426 ntBASIC16.31■□□□□ 0.2
NUP43Q8NFH3 STK19B-204ENST00000512515 211 ntBASIC16.31■□□□□ 0.2
NUP43Q8NFH3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 AC092329.2-201ENST00000598402 547 ntBASIC16.31■□□□□ 0.2
NUP43Q8NFH3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.31■□□□□ 0.2
NUP43Q8NFH3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 AC093458.2-201ENST00000623150 629 ntBASIC16.31■□□□□ 0.2
NUP43Q8NFH3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 INTS4P1-201ENST00000438455 1935 ntBASIC16.31■□□□□ 0.2
NUP43Q8NFH3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUP43Q8NFH3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 RCN1P2-201ENST00000398357 915 ntBASIC16.3■□□□□ 0.2
NUP43Q8NFH3 POM121L3P-201ENST00000419331 1163 ntBASIC16.3■□□□□ 0.2
NUP43Q8NFH3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 AC012615.1-201ENST00000565797 1299 ntBASIC16.3■□□□□ 0.2
NUP43Q8NFH3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 AD001527.2-201ENST00000622994 785 ntBASIC16.3■□□□□ 0.2
NUP43Q8NFH3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUP43Q8NFH3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 PRORSD1P-202ENST00000563365 2154 ntBASIC16.29■□□□□ 0.2
NUP43Q8NFH3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUP43Q8NFH3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms