Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 DUTP2-201ENST00000519164 463 ntBASIC18.3■□□□□ 0.52
TTC16Q8NEE8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 AC109462.3-201ENST00000573934 613 ntBASIC18.3■□□□□ 0.52
TTC16Q8NEE8 MIR1199-201ENST00000621445 119 ntBASIC18.3■□□□□ 0.52
TTC16Q8NEE8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 AC122714.2-201ENST00000502787 707 ntBASIC18.29■□□□□ 0.52
TTC16Q8NEE8 IGHV3-22-201ENST00000520721 359 ntBASIC18.29■□□□□ 0.52
TTC16Q8NEE8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 AL356488.2-201ENST00000602755 427 ntBASIC18.29■□□□□ 0.52
TTC16Q8NEE8 AC140113.2-201ENST00000604370 208 ntBASIC18.29■□□□□ 0.52
TTC16Q8NEE8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 AC116407.2-201ENST00000613639 860 ntBASIC18.29■□□□□ 0.52
TTC16Q8NEE8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 AC117500.6-201ENST00000624871 588 ntBASIC18.29■□□□□ 0.52
TTC16Q8NEE8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC16Q8NEE8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 COX5BP2-201ENST00000392354 334 ntBASIC18.28■□□□□ 0.52
TTC16Q8NEE8 AC103564.2-201ENST00000432853 1299 ntBASIC18.28■□□□□ 0.52
TTC16Q8NEE8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 Z83851.2-201ENST00000609564 659 ntBASIC18.28■□□□□ 0.52
TTC16Q8NEE8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TTC16Q8NEE8 AL138781.2-201ENST00000617896 1843 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms