Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 AL023806.1-201ENST00000603994 1649 ntBASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 AC007967.3-201ENST00000434308 558 ntBASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 AC108860.2-201ENST00000562760 2183 ntBASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 AL138831.2-201ENST00000606564 490 ntBASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 AL121672.3-201ENST00000608644 468 ntBASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 AL590326.2-201ENST00000625139 305 ntBASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF439Q8NDP4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 AC126755.1-201ENST00000525846 6405 ntBASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 CROCCP2-202ENST00000412962 2773 ntBASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 CHCHD2P8-201ENST00000429873 447 ntBASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 AC002558.1-201ENST00000488906 803 ntBASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 AC016734.2-201ENST00000624325 1377 ntBASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 AC009053.2-201ENST00000563701 2365 ntBASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ZNF439Q8NDP4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF439Q8NDP4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.43□□□□□ -0.1
ZNF439Q8NDP4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.43□□□□□ -0.1
ZNF439Q8NDP4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF439Q8NDP4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms