Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CARMIL3Q8ND23 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.67■■□□□ 1.06
CARMIL3Q8ND23 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 AL135999.2-201ENST00000622438 1686 ntBASIC21.66■■□□□ 1.06
CARMIL3Q8ND23 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 AL354751.1-201ENST00000412768 1863 ntBASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 AC007613.1-201ENST00000572811 2597 ntBASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 AC069262.1-201ENST00000539058 672 ntBASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 AC046185.3-201ENST00000623228 1824 ntBASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CARMIL3Q8ND23 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 MIR661-201ENST00000384842 89 ntBASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 KRT8P48-201ENST00000515599 1220 ntBASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 AC026120.1-201ENST00000611536 926 ntBASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.64■■□□□ 1.06
CARMIL3Q8ND23 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 AP000997.3-201ENST00000623333 2250 ntBASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 AC129492.6-201ENST00000611383 1305 ntBASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 REXO1L9P-201ENST00000604264 2108 ntBASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.64■■□□□ 1.05
CARMIL3Q8ND23 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 AC067863.1-201ENST00000494933 530 ntBASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 AC093214.1-201ENST00000511688 1107 ntBASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.63■■□□□ 1.05
CARMIL3Q8ND23 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms