Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NANOGP1Q8N7R0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 RPS2P55-201ENST00000397318 883 ntBASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 AC009947.2-201ENST00000444014 672 ntBASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 AC107956.1-201ENST00000494359 873 ntBASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 AC090192.1-201ENST00000517740 490 ntBASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 AC024563.2-201ENST00000603282 481 ntBASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 AL157888.1-201ENST00000631930 593 ntBASIC15.52■□□□□ 0.08
NANOGP1Q8N7R0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NANOGP1Q8N7R0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NANOGP1Q8N7R0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NANOGP1Q8N7R0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.52■□□□□ 0.07
NANOGP1Q8N7R0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NANOGP1Q8N7R0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.52■□□□□ 0.07
NANOGP1Q8N7R0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
NANOGP1Q8N7R0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NANOGP1Q8N7R0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.52■□□□□ 0.07
NANOGP1Q8N7R0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.52■□□□□ 0.07
NANOGP1Q8N7R0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms