Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 AC132938.5-201ENST00000624980 1813 ntBASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 KLF4P1-201ENST00000412782 1185 ntBASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 AL020989.1-201ENST00000422979 469 ntBASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 STK25P1-201ENST00000585406 838 ntBASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 PRORSD1P-202ENST00000563365 2154 ntBASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDH20Q8N6Y1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 AP001005.1-201ENST00000571755 1248 ntBASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 AL022326.1-202ENST00000641533 845 ntBASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 AC009053.2-201ENST00000563701 2365 ntBASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH20Q8N6Y1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 PKD1P1-201ENST00000458669 6805 ntBASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 HLA-A-201ENST00000376802 1334 ntBASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms