Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRAM1L1Q8N609 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRAM1L1Q8N609 HLA-A-201ENST00000376802 1334 ntBASIC17.19■□□□□ 0.34
TRAM1L1Q8N609 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAM1L1Q8N609 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAM1L1Q8N609 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 MIR7706-201ENST00000613747 67 ntBASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAM1L1Q8N609 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 KRT18P27-201ENST00000427733 1299 ntBASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 AC105339.3-201ENST00000560043 636 ntBASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 AL049840.3-201ENST00000602669 611 ntBASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 PCDHB18P-201ENST00000524813 2368 ntBASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAM1L1Q8N609 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 CROCCP2-202ENST00000412962 2773 ntBASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms