Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 AC092919.2-201ENST00000623631 1645 ntBASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 AC025678.2-201ENST00000562061 970 ntBASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 AL096865.1-201ENST00000606796 927 ntBASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 REXO1L3P-201ENST00000622202 1288 ntBASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TMEFF1Q8IYR6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 RNF165-205ENST00000588679 2904 ntBASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 AC244107.1-201ENST00000442033 332 ntBASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 AL513480.1-201ENST00000451731 511 ntBASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 AC002558.1-201ENST00000488906 803 ntBASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 HLA-J-203ENST00000494367 1087 ntBASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 AC109322.1-201ENST00000524499 1264 ntBASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 AC022145.2-201ENST00000598203 171 ntBASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 AC006116.8-202ENST00000587620 1550 ntBASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEFF1Q8IYR6 AL590787.1-201ENST00000568856 1315 ntBASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 HCG11-201ENST00000411553 5696 ntBASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 MYCLP1-201ENST00000372451 1075 ntBASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms