Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 AL023284.2-201ENST00000405850 579 ntBASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 AC069152.1-201ENST00000438030 544 ntBASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 RPS2P4-201ENST00000476944 856 ntBASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 AC130371.2-201ENST00000619443 611 ntBASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 AL023875.1-201ENST00000640777 796 ntBASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 AC092053.1-201ENST00000605787 1936 ntBASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 KRT8P9-201ENST00000558927 1449 ntBASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 KRASP1-201ENST00000407852 552 ntBASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 AC233263.1-201ENST00000578059 224 ntBASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 AC069544.1-201ENST00000609399 999 ntBASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 TNRC18P2-201ENST00000417666 2714 ntBASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD2Q8IV50 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 KRT17P3-201ENST00000420566 1262 ntBASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms