Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
OTOP1Q7RTM1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.08■□□□□ 0.8
OTOP1Q7RTM1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
OTOP1Q7RTM1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.08■□□□□ 0.8
OTOP1Q7RTM1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
OTOP1Q7RTM1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
OTOP1Q7RTM1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.08■□□□□ 0.8
OTOP1Q7RTM1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.08■□□□□ 0.8
OTOP1Q7RTM1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 DDX43P3-201ENST00000441064 443 ntBASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 SIGLEC30P-201ENST00000455569 941 ntBASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OTOP1Q7RTM1 AC132938.5-201ENST00000624980 1813 ntBASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 AL353593.2-201ENST00000602529 1483 ntBASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
OTOP1Q7RTM1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 PTCHD3P3-201ENST00000403073 906 ntBASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 AL627223.1-201ENST00000416693 442 ntBASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 AL353135.1-201ENST00000606729 504 ntBASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 GGTLC5P-201ENST00000617623 998 ntBASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms