Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 KLF2P3-201ENST00000451977 1087 ntBASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 MIR3909-201ENST00000579518 119 ntBASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 PRR29-209ENST00000582540 967 ntTSL 2 BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
CCDC141Q6ZP82 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 NAA60-208ENST00000570819 833 ntTSL 2 BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC141Q6ZP82 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 AC125807.1-201ENST00000483097 614 ntBASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 LINC01225-203ENST00000563550 1244 ntBASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 RNU1-129P-201ENST00000384064 167 ntBASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 MIR661-201ENST00000384842 89 ntBASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 U1.21-201ENST00000580816 167 ntBASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 RAB34-224ENST00000636513 888 ntTSL 5 BASIC25.66■■□□□ 1.7
CCDC141Q6ZP82 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 AL353732.1-201ENST00000569618 1459 ntBASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 SLC22A20-204ENST00000530038 1673 ntBASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 CCDC74BP1-201ENST00000508880 1123 ntBASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 AL031055.1-201ENST00000606362 631 ntBASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC141Q6ZP82 AC104581.1-202ENST00000635932 2618 ntBASIC25.64■■□□□ 1.7
CCDC141Q6ZP82 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC141Q6ZP82 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC141Q6ZP82 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC141Q6ZP82 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC141Q6ZP82 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
CCDC141Q6ZP82 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC141Q6ZP82 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC141Q6ZP82 AC012569.1-201ENST00000591191 1524 ntBASIC25.64■■□□□ 1.7
CCDC141Q6ZP82 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC141Q6ZP82 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC141Q6ZP82 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC141Q6ZP82 EGFEM1P-202ENST00000431685 1563 ntBASIC25.64■■□□□ 1.69
CCDC141Q6ZP82 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC141Q6ZP82 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC141Q6ZP82 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC25.64■■□□□ 1.69
CCDC141Q6ZP82 HCG4-201ENST00000418983 998 ntBASIC25.64■■□□□ 1.69
CCDC141Q6ZP82 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC25.64■■□□□ 1.69
CCDC141Q6ZP82 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC25.64■■□□□ 1.69
CCDC141Q6ZP82 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
CCDC141Q6ZP82 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC141Q6ZP82 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms