Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 PCDHA3-202ENST00000532566 4594 ntBASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP4Q6PIL6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP4Q6PIL6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP4Q6PIL6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms