Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KRT39Q6A163 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
KRT39Q6A163 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
KRT39Q6A163 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KRT39Q6A163 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT39Q6A163 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
KRT39Q6A163 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT39Q6A163 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT39Q6A163 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT39Q6A163 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT39Q6A163 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRT39Q6A163 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT39Q6A163 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT39Q6A163 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 AP001094.4-201ENST00000579008 2176 ntBASIC18.79■□□□□ 0.6
KRT39Q6A163 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.79■□□□□ 0.6
KRT39Q6A163 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT39Q6A163 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT39Q6A163 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
KRT39Q6A163 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
KRT39Q6A163 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT39Q6A163 RBM17P3-201ENST00000417687 1192 ntBASIC18.79■□□□□ 0.6
KRT39Q6A163 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT39Q6A163 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.79■□□□□ 0.6
KRT39Q6A163 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.79■□□□□ 0.6
KRT39Q6A163 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT39Q6A163 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT39Q6A163 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT39Q6A163 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 AC093525.9-201ENST00000624961 1746 ntBASIC18.79■□□□□ 0.6
KRT39Q6A163 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
KRT39Q6A163 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
KRT39Q6A163 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT39Q6A163 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT39Q6A163 AC106820.2-201ENST00000563775 3264 ntBASIC18.78■□□□□ 0.6
KRT39Q6A163 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT39Q6A163 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT39Q6A163 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
KRT39Q6A163 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT39Q6A163 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT39Q6A163 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT39Q6A163 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT39Q6A163 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT39Q6A163 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT39Q6A163 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT39Q6A163 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT39Q6A163 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT39Q6A163 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT39Q6A163 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT39Q6A163 LTB4R2-202ENST00000528054 3092 ntBASIC18.78■□□□□ 0.6
KRT39Q6A163 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT39Q6A163 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT39Q6A163 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT39Q6A163 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
KRT39Q6A163 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KRT39Q6A163 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT39Q6A163 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT39Q6A163 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT39Q6A163 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT39Q6A163 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT39Q6A163 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KRT39Q6A163 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT39Q6A163 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 SLC25A1P3-201ENST00000395415 828 ntBASIC18.77■□□□□ 0.6
KRT39Q6A163 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT39Q6A163 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT39Q6A163 LINC01711-201ENST00000598340 967 ntBASIC18.77■□□□□ 0.6
KRT39Q6A163 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
KRT39Q6A163 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT39Q6A163 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT39Q6A163 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
KRT39Q6A163 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT39Q6A163 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT39Q6A163 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT39Q6A163 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.77■□□□□ 0.59
KRT39Q6A163 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms