Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 AC087388.1-201ENST00000571370 1112 ntBASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 AGGF1P2-201ENST00000426656 2106 ntBASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 CICP6-201ENST00000457191 2729 ntBASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 AL645929.1-201ENST00000420084 975 ntBASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATPAF1Q5TC12 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 GPR32P1-201ENST00000601788 811 ntBASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 AL445228.2-201ENST00000605589 952 ntBASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms