Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 AC012313.10-201ENST00000623509 926 ntBASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CBWD3Q5JTY5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 TSPY19P-201ENST00000418461 509 ntBASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 TSPY18P-201ENST00000441642 509 ntBASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 KRT18P31-201ENST00000506277 1292 ntBASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 AC009053.2-201ENST00000563701 2365 ntBASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 LINC02012-201ENST00000608206 1725 ntBASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 AC004817.3-201ENST00000602957 2129 ntBASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBWD3Q5JTY5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 AP005117.1-201ENST00000584346 1413 ntBASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBWD3Q5JTY5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 SIGLEC16-201ENST00000599858 1437 ntBASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 AL020989.1-201ENST00000422979 469 ntBASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms