Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 RPS15P9-201ENST00000494093 319 ntBASIC21.19■□□□□ 0.98
TNNI3KQ59H18 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 AC145285.3-201ENST00000564603 959 ntBASIC21.19■□□□□ 0.98
TNNI3KQ59H18 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 AL805961.1-202ENST00000641562 540 ntBASIC21.19■□□□□ 0.98
TNNI3KQ59H18 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TNNI3KQ59H18 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 AC116353.5-201ENST00000638148 1699 ntBASIC21.18■□□□□ 0.98
TNNI3KQ59H18 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 AC005593.1-201ENST00000624894 515 ntBASIC21.18■□□□□ 0.98
TNNI3KQ59H18 PGM5P2-202ENST00000637225 1043 ntBASIC21.18■□□□□ 0.98
TNNI3KQ59H18 AF228730.7-201ENST00000641842 219 ntBASIC21.18■□□□□ 0.98
TNNI3KQ59H18 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TNNI3KQ59H18 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 AC104109.2-201ENST00000602919 1418 ntBASIC21.17■□□□□ 0.98
TNNI3KQ59H18 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 AC141586.5-201ENST00000624546 2050 ntBASIC21.17■□□□□ 0.98
TNNI3KQ59H18 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNNI3KQ59H18 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 AC009947.1-201ENST00000444350 727 ntBASIC21.16■□□□□ 0.98
TNNI3KQ59H18 AC034105.1-201ENST00000563488 319 ntBASIC21.16■□□□□ 0.98
TNNI3KQ59H18 AC106730.1-201ENST00000566722 1090 ntBASIC21.16■□□□□ 0.98
TNNI3KQ59H18 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 AC008667.4-201ENST00000607370 168 ntBASIC21.16■□□□□ 0.98
TNNI3KQ59H18 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNNI3KQ59H18 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms