Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 EGFEM1P-202ENST00000431685 1563 ntBASIC20.96■□□□□ 0.95
RFX7Q2KHR2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 AC040169.1-201ENST00000565382 521 ntBASIC20.96■□□□□ 0.95
RFX7Q2KHR2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 MIR1199-201ENST00000621445 119 ntBASIC20.96■□□□□ 0.95
RFX7Q2KHR2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 AC006504.4-201ENST00000592118 1568 ntBASIC20.95■□□□□ 0.94
RFX7Q2KHR2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 RPSAP43-201ENST00000402237 625 ntBASIC20.95■□□□□ 0.94
RFX7Q2KHR2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 AC010327.4-202ENST00000591484 748 ntBASIC20.95■□□□□ 0.94
RFX7Q2KHR2 AC064836.3-201ENST00000607928 673 ntBASIC20.95■□□□□ 0.94
RFX7Q2KHR2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
RFX7Q2KHR2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 NCF1C-201ENST00000438382 1427 ntBASIC20.94■□□□□ 0.94
RFX7Q2KHR2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 AC093525.9-201ENST00000624961 1746 ntBASIC20.94■□□□□ 0.94
RFX7Q2KHR2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 AC004832.2-201ENST00000426397 482 ntBASIC20.94■□□□□ 0.94
RFX7Q2KHR2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 AC092183.1-201ENST00000469884 875 ntBASIC20.94■□□□□ 0.94
RFX7Q2KHR2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 AC055717.3-201ENST00000622967 595 ntBASIC20.94■□□□□ 0.94
RFX7Q2KHR2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 PGM5P2-202ENST00000637225 1043 ntBASIC20.94■□□□□ 0.94
RFX7Q2KHR2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.94■□□□□ 0.94
RFX7Q2KHR2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.93■□□□□ 0.94
RFX7Q2KHR2 UPF3AP3-201ENST00000420996 769 ntBASIC20.93■□□□□ 0.94
RFX7Q2KHR2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 RNA5SP416-201ENST00000516838 111 ntBASIC20.93■□□□□ 0.94
RFX7Q2KHR2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms