Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
YBX1P67809 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
YBX1P67809 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.98■□□□□ 0.31
YBX1P67809 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
YBX1P67809 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
YBX1P67809 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
YBX1P67809 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.97■□□□□ 0.31
YBX1P67809 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.97■□□□□ 0.31
YBX1P67809 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.97■□□□□ 0.31
YBX1P67809 EMBP1-201ENST00000458200 901 ntBASIC16.97■□□□□ 0.31
YBX1P67809 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.97■□□□□ 0.31
YBX1P67809 AC122714.2-201ENST00000502787 707 ntBASIC16.97■□□□□ 0.31
YBX1P67809 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.97■□□□□ 0.31
YBX1P67809 AC109462.3-201ENST00000573934 613 ntBASIC16.97■□□□□ 0.31
YBX1P67809 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.97■□□□□ 0.31
YBX1P67809 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.97■□□□□ 0.31
YBX1P67809 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.97■□□□□ 0.31
YBX1P67809 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.97■□□□□ 0.31
YBX1P67809 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
YBX1P67809 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
YBX1P67809 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
YBX1P67809 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.96■□□□□ 0.31
YBX1P67809 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.96■□□□□ 0.31
YBX1P67809 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
YBX1P67809 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.96■□□□□ 0.31
YBX1P67809 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
YBX1P67809 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
YBX1P67809 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 AL450487.1-201ENST00000426799 995 ntBASIC16.96■□□□□ 0.31
YBX1P67809 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.96■□□□□ 0.31
YBX1P67809 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.96■□□□□ 0.31
YBX1P67809 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.96■□□□□ 0.31
YBX1P67809 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.96■□□□□ 0.31
YBX1P67809 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.96■□□□□ 0.31
YBX1P67809 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.96■□□□□ 0.31
YBX1P67809 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
YBX1P67809 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
YBX1P67809 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.96■□□□□ 0.31
YBX1P67809 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.96■□□□□ 0.31
YBX1P67809 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.96■□□□□ 0.31
YBX1P67809 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YBX1P67809 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.96■□□□□ 0.31
YBX1P67809 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
YBX1P67809 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
YBX1P67809 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
YBX1P67809 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
YBX1P67809 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.96■□□□□ 0.3
YBX1P67809 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.96■□□□□ 0.3
YBX1P67809 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
YBX1P67809 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
YBX1P67809 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.96■□□□□ 0.3
YBX1P67809 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.96■□□□□ 0.3
YBX1P67809 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
YBX1P67809 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms