Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
EPHB4P54760 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
EPHB4P54760 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
EPHB4P54760 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHB4P54760 AC079776.2-201ENST00000641154 1609 ntBASIC19.58■□□□□ 0.72
EPHB4P54760 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.57■□□□□ 0.72
EPHB4P54760 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
EPHB4P54760 SIRPAP1-201ENST00000448467 1770 ntBASIC19.57■□□□□ 0.72
EPHB4P54760 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
EPHB4P54760 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
EPHB4P54760 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
EPHB4P54760 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.57■□□□□ 0.72
EPHB4P54760 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.57■□□□□ 0.72
EPHB4P54760 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHB4P54760 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.57■□□□□ 0.72
EPHB4P54760 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHB4P54760 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
EPHB4P54760 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHB4P54760 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.57■□□□□ 0.72
EPHB4P54760 SPCS2P1-201ENST00000561636 679 ntBASIC19.57■□□□□ 0.72
EPHB4P54760 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
EPHB4P54760 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 AL078644.1-201ENST00000609881 752 ntBASIC19.57■□□□□ 0.72
EPHB4P54760 AL513190.1-201ENST00000621254 727 ntBASIC19.57■□□□□ 0.72
EPHB4P54760 AL022326.1-202ENST00000641533 845 ntBASIC19.57■□□□□ 0.72
EPHB4P54760 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.57■□□□□ 0.72
EPHB4P54760 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHB4P54760 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
EPHB4P54760 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.57■□□□□ 0.72
EPHB4P54760 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB4P54760 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
EPHB4P54760 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
EPHB4P54760 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
EPHB4P54760 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
EPHB4P54760 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.56■□□□□ 0.72
EPHB4P54760 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
EPHB4P54760 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.56■□□□□ 0.72
EPHB4P54760 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.56■□□□□ 0.72
EPHB4P54760 COX20P2-201ENST00000452636 358 ntBASIC19.56■□□□□ 0.72
EPHB4P54760 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.56■□□□□ 0.72
EPHB4P54760 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.56■□□□□ 0.72
EPHB4P54760 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.56■□□□□ 0.72
EPHB4P54760 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.56■□□□□ 0.72
EPHB4P54760 AC018845.2-201ENST00000568326 409 ntBASIC19.56■□□□□ 0.72
EPHB4P54760 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.56■□□□□ 0.72
EPHB4P54760 AC027612.4-201ENST00000605371 583 ntBASIC19.56■□□□□ 0.72
EPHB4P54760 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.56■□□□□ 0.72
EPHB4P54760 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB4P54760 AC002310.6-201ENST00000624451 1377 ntBASIC19.56■□□□□ 0.72
EPHB4P54760 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.55■□□□□ 0.72
EPHB4P54760 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.55■□□□□ 0.72
EPHB4P54760 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB4P54760 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB4P54760 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB4P54760 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB4P54760 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.55■□□□□ 0.72
EPHB4P54760 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.55■□□□□ 0.72
EPHB4P54760 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.55■□□□□ 0.72
EPHB4P54760 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.55■□□□□ 0.72
EPHB4P54760 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.55■□□□□ 0.72
EPHB4P54760 AC011467.4-201ENST00000594891 528 ntBASIC19.55■□□□□ 0.72
EPHB4P54760 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
EPHB4P54760 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.55■□□□□ 0.72
EPHB4P54760 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB4P54760 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB4P54760 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
EPHB4P54760 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
EPHB4P54760 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.54■□□□□ 0.72
EPHB4P54760 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EPHB4P54760 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.54■□□□□ 0.72
EPHB4P54760 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
EPHB4P54760 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EPHB4P54760 AC009053.2-201ENST00000563701 2365 ntBASIC19.54■□□□□ 0.72
EPHB4P54760 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EPHB4P54760 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.54■□□□□ 0.72
EPHB4P54760 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EPHB4P54760 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EPHB4P54760 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms