Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB3P54753 DNAJB3-202ENST00000449667 1266 ntBASIC18.13■□□□□ 0.49
EPHB3P54753 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB3P54753 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHB3P54753 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHB3P54753 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.13■□□□□ 0.49
EPHB3P54753 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHB3P54753 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.13■□□□□ 0.49
EPHB3P54753 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHB3P54753 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.13■□□□□ 0.49
EPHB3P54753 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB3P54753 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB3P54753 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB3P54753 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB3P54753 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
EPHB3P54753 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
EPHB3P54753 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB3P54753 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB3P54753 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB3P54753 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB3P54753 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB3P54753 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
EPHB3P54753 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHB3P54753 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHB3P54753 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
EPHB3P54753 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
EPHB3P54753 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHB3P54753 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EPHB3P54753 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 HTR5BP-201ENST00000430851 1154 ntBASIC18.12■□□□□ 0.49
EPHB3P54753 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
EPHB3P54753 MKNK2P1-201ENST00000437526 628 ntBASIC18.12■□□□□ 0.49
EPHB3P54753 RHOQP3-201ENST00000437982 621 ntBASIC18.12■□□□□ 0.49
EPHB3P54753 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 ALG1L5P-201ENST00000482043 771 ntBASIC18.12■□□□□ 0.49
EPHB3P54753 YBX1P5-201ENST00000509441 847 ntBASIC18.12■□□□□ 0.49
EPHB3P54753 KRT19P2-202ENST00000557173 1012 ntBASIC18.12■□□□□ 0.49
EPHB3P54753 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHB3P54753 PDPK2P-202ENST00000562415 1191 ntBASIC18.12■□□□□ 0.49
EPHB3P54753 MIR4469-201ENST00000583919 79 ntBASIC18.12■□□□□ 0.49
EPHB3P54753 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHB3P54753 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHB3P54753 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHB3P54753 AC023141.13-201ENST00000604991 943 ntBASIC18.12■□□□□ 0.49
EPHB3P54753 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EPHB3P54753 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHB3P54753 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.12■□□□□ 0.49
EPHB3P54753 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHB3P54753 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 OR6D1P-202ENST00000641007 5290 ntBASIC18.12■□□□□ 0.49
EPHB3P54753 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB3P54753 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHB3P54753 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHB3P54753 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHB3P54753 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB3P54753 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB3P54753 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB3P54753 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB3P54753 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB3P54753 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB3P54753 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB3P54753 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EPHB3P54753 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
EPHB3P54753 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB3P54753 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB3P54753 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EPHB3P54753 AP006288.1-201ENST00000446065 395 ntBASIC18.11■□□□□ 0.49
EPHB3P54753 CXCL1P1-201ENST00000502804 216 ntBASIC18.11■□□□□ 0.49
EPHB3P54753 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHB3P54753 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHB3P54753 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.11■□□□□ 0.49
EPHB3P54753 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHB3P54753 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB3P54753 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHB3P54753 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHB3P54753 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHB3P54753 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHB3P54753 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHB3P54753 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EPHB3P54753 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.11■□□□□ 0.49
EPHB3P54753 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB3P54753 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
EPHB3P54753 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EPHB3P54753 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB3P54753 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
EPHB3P54753 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.1■□□□□ 0.49
EPHB3P54753 AC025580.3-201ENST00000617932 1424 ntBASIC18.1■□□□□ 0.49
EPHB3P54753 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms